Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 MIR3621-201ENST00000580529 85 ntBASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ARFGEF3Q5TH69 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ARFGEF3Q5TH69 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ARFGEF3Q5TH69 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ARFGEF3Q5TH69 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 MIR6724-1-201ENST00000616420 92 ntBASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 MIR6724-2-201ENST00000616483 92 ntBASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 MIR6724-4-201ENST00000617390 92 ntBASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 MIR6724-3-201ENST00000622482 92 ntBASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 MTDHP2-201ENST00000601468 714 ntBASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.88■□□□□ 0.77
ARFGEF3Q5TH69 AC090877.2-201ENST00000558441 1738 ntBASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.87■□□□□ 0.77
ARFGEF3Q5TH69 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.86■□□□□ 0.77
ARFGEF3Q5TH69 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 AC010997.5-201ENST00000609182 354 ntBASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 DUSP8P4-201ENST00000399538 1761 ntBASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 SLC6A10P-202ENST00000431994 2058 ntBASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 AL117332.1-201ENST00000622628 974 ntBASIC19.85■□□□□ 0.77
ARFGEF3Q5TH69 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 AL512631.2-201ENST00000604634 923 ntBASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 MIR4466-201ENST00000606121 54 ntBASIC19.84■□□□□ 0.77
ARFGEF3Q5TH69 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ARFGEF3Q5TH69 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF3Q5TH69 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 AC008406.3-201ENST00000620001 1374 ntBASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
ARFGEF3Q5TH69 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF3Q5TH69 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARFGEF3Q5TH69 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.8■□□□□ 0.76
ARFGEF3Q5TH69 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARFGEF3Q5TH69 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.8■□□□□ 0.76
ARFGEF3Q5TH69 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARFGEF3Q5TH69 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARFGEF3Q5TH69 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms