Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS1BP61024 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CKS1BP61024 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.12■□□□□ 0.17
CKS1BP61024 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS1BP61024 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKS1BP61024 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CKS1BP61024 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.11■□□□□ 0.17
CKS1BP61024 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CKS1BP61024 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CKS1BP61024 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.11■□□□□ 0.17
CKS1BP61024 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CKS1BP61024 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CKS1BP61024 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.11■□□□□ 0.17
CKS1BP61024 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKS1BP61024 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.1■□□□□ 0.17
CKS1BP61024 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKS1BP61024 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKS1BP61024 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKS1BP61024 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKS1BP61024 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
CKS1BP61024 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.1■□□□□ 0.17
CKS1BP61024 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CKS1BP61024 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.1■□□□□ 0.17
CKS1BP61024 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKS1BP61024 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKS1BP61024 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.1■□□□□ 0.17
CKS1BP61024 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CKS1BP61024 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS1BP61024 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS1BP61024 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS1BP61024 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CKS1BP61024 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.09■□□□□ 0.17
CKS1BP61024 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.09■□□□□ 0.17
CKS1BP61024 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CKS1BP61024 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CKS1BP61024 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.09■□□□□ 0.17
CKS1BP61024 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.09■□□□□ 0.17
CKS1BP61024 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CKS1BP61024 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CKS1BP61024 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.08■□□□□ 0.16
CKS1BP61024 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.08■□□□□ 0.16
CKS1BP61024 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CKS1BP61024 AC008813.1-201ENST00000536597 885 ntBASIC16.08■□□□□ 0.16
CKS1BP61024 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.08■□□□□ 0.16
CKS1BP61024 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.08■□□□□ 0.16
CKS1BP61024 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CKS1BP61024 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CKS1BP61024 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CKS1BP61024 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKS1BP61024 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CKS1BP61024 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CKS1BP61024 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CKS1BP61024 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.07■□□□□ 0.16
CKS1BP61024 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.07■□□□□ 0.16
CKS1BP61024 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKS1BP61024 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CKS1BP61024 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
CKS1BP61024 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 AC022211.4-201ENST00000625094 2161 ntBASIC16.06■□□□□ 0.16
CKS1BP61024 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CKS1BP61024 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.06■□□□□ 0.16
CKS1BP61024 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.06■□□□□ 0.16
CKS1BP61024 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.06■□□□□ 0.16
CKS1BP61024 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CKS1BP61024 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKS1BP61024 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKS1BP61024 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.05■□□□□ 0.16
CKS1BP61024 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKS1BP61024 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKS1BP61024 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKS1BP61024 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKS1BP61024 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKS1BP61024 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.04■□□□□ 0.16
CKS1BP61024 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKS1BP61024 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CKS1BP61024 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.04■□□□□ 0.16
CKS1BP61024 AF106564.1-201ENST00000607058 2553 ntBASIC16.04■□□□□ 0.16
CKS1BP61024 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKS1BP61024 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKS1BP61024 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.04■□□□□ 0.16
CKS1BP61024 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.03■□□□□ 0.16
CKS1BP61024 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CKS1BP61024 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CKS1BP61024 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms