Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM50BP56557 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM50BP56557 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM50BP56557 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TMEM50BP56557 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TMEM50BP56557 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM50BP56557 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TMEM50BP56557 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 RP9P-202ENST00000450133 1212 ntBASIC19.79■□□□□ 0.76
TMEM50BP56557 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM50BP56557 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM50BP56557 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM50BP56557 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TMEM50BP56557 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM50BP56557 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM50BP56557 ECEL1P2-201ENST00000461596 1295 ntBASIC19.78■□□□□ 0.76
TMEM50BP56557 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.78■□□□□ 0.76
TMEM50BP56557 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TMEM50BP56557 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM50BP56557 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM50BP56557 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM50BP56557 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TMEM50BP56557 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM50BP56557 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM50BP56557 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TMEM50BP56557 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM50BP56557 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM50BP56557 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM50BP56557 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM50BP56557 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.77■□□□□ 0.75
TMEM50BP56557 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TMEM50BP56557 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM50BP56557 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM50BP56557 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM50BP56557 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM50BP56557 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM50BP56557 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM50BP56557 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM50BP56557 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM50BP56557 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM50BP56557 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.75■□□□□ 0.75
TMEM50BP56557 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.75■□□□□ 0.75
TMEM50BP56557 AC093536.1-201ENST00000569153 554 ntBASIC19.75■□□□□ 0.75
TMEM50BP56557 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM50BP56557 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM50BP56557 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.75■□□□□ 0.75
TMEM50BP56557 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM50BP56557 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM50BP56557 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM50BP56557 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM50BP56557 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM50BP56557 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM50BP56557 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM50BP56557 FOXO3B-201ENST00000395675 1928 ntBASIC19.73■□□□□ 0.75
TMEM50BP56557 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.73■□□□□ 0.75
TMEM50BP56557 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM50BP56557 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM50BP56557 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TMEM50BP56557 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM50BP56557 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM50BP56557 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM50BP56557 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.72■□□□□ 0.75
TMEM50BP56557 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TMEM50BP56557 C9orf163-202ENST00000624034 2573 ntBASIC19.72■□□□□ 0.75
TMEM50BP56557 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM50BP56557 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMEM50BP56557 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM50BP56557 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TMEM50BP56557 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM50BP56557 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.7■□□□□ 0.74
TMEM50BP56557 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TMEM50BP56557 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TMEM50BP56557 AC022413.1-201ENST00000624602 984 ntBASIC19.7■□□□□ 0.74
TMEM50BP56557 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM50BP56557 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM50BP56557 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM50BP56557 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms