Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLCNKAP51800 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.92■■□□□ 1.26
CLCNKAP51800 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.92■■□□□ 1.26
CLCNKAP51800 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLCNKAP51800 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLCNKAP51800 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLCNKAP51800 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
CLCNKAP51800 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.91■■□□□ 1.26
CLCNKAP51800 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.91■■□□□ 1.26
CLCNKAP51800 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLCNKAP51800 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLCNKAP51800 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLCNKAP51800 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLCNKAP51800 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.9■■□□□ 1.26
CLCNKAP51800 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.9■■□□□ 1.26
CLCNKAP51800 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLCNKAP51800 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLCNKAP51800 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.9■■□□□ 1.26
CLCNKAP51800 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CLCNKAP51800 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CLCNKAP51800 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
CLCNKAP51800 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CLCNKAP51800 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CLCNKAP51800 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.89■■□□□ 1.25
CLCNKAP51800 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.89■■□□□ 1.25
CLCNKAP51800 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLCNKAP51800 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLCNKAP51800 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLCNKAP51800 AF131216.4-201ENST00000638924 1588 ntBASIC22.89■■□□□ 1.25
CLCNKAP51800 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CLCNKAP51800 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLCNKAP51800 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLCNKAP51800 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.88■■□□□ 1.25
CLCNKAP51800 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CLCNKAP51800 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLCNKAP51800 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLCNKAP51800 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.87■■□□□ 1.25
CLCNKAP51800 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.87■■□□□ 1.25
CLCNKAP51800 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 MIR6089-201ENST00000616698 64 ntBASIC22.87■■□□□ 1.25
CLCNKAP51800 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLCNKAP51800 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLCNKAP51800 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.86■■□□□ 1.25
CLCNKAP51800 AC092028.1-203ENST00000608262 953 ntBASIC22.86■■□□□ 1.25
CLCNKAP51800 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLCNKAP51800 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLCNKAP51800 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CLCNKAP51800 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.85■■□□□ 1.25
CLCNKAP51800 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.85■■□□□ 1.25
CLCNKAP51800 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.85■■□□□ 1.25
CLCNKAP51800 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCNKAP51800 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLCNKAP51800 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCNKAP51800 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CLCNKAP51800 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CLCNKAP51800 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCNKAP51800 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCNKAP51800 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.84■■□□□ 1.25
CLCNKAP51800 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.84■■□□□ 1.25
CLCNKAP51800 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CLCNKAP51800 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CLCNKAP51800 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.84■■□□□ 1.25
CLCNKAP51800 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
CLCNKAP51800 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CLCNKAP51800 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.83■■□□□ 1.25
CLCNKAP51800 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.83■■□□□ 1.25
CLCNKAP51800 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.83■■□□□ 1.25
CLCNKAP51800 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
CLCNKAP51800 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.83■■□□□ 1.25
CLCNKAP51800 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLCNKAP51800 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
CLCNKAP51800 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.83■■□□□ 1.24
CLCNKAP51800 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CLCNKAP51800 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.82■■□□□ 1.24
CLCNKAP51800 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLCNKAP51800 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLCNKAP51800 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLCNKAP51800 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.82■■□□□ 1.24
CLCNKAP51800 AL356441.2-201ENST00000443009 864 ntBASIC22.82■■□□□ 1.24
CLCNKAP51800 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.82■■□□□ 1.24
CLCNKAP51800 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CLCNKAP51800 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.82■■□□□ 1.24
CLCNKAP51800 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CLCNKAP51800 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms