Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 SPS19YNL202W 879 nt6.35□□□□□ -1.39
RPN11P43588 HXT13YEL069C 1695 nt6.35□□□□□ -1.39
RPN11P43588 TRP5YGL026C 2124 nt6.35□□□□□ -1.39
RPN11P43588 QRI1YDL103C 1434 nt6.34□□□□□ -1.39
RPN11P43588 DCC1YCL016C 1143 nt6.34□□□□□ -1.39
RPN11P43588 ATG23YLR431C 1362 nt6.33□□□□□ -1.4
RPN11P43588 BUD9YGR041W 1644 nt6.33□□□□□ -1.4
RPN11P43588 YGR035W-AYGR035W-A 222 nt6.33□□□□□ -1.4
RPN11P43588 YBR226CYBR226C 411 nt6.33□□□□□ -1.4
RPN11P43588 ENT2YLR206W 1842 nt6.33□□□□□ -1.4
RPN11P43588 MKS1YNL076W 1755 nt6.33□□□□□ -1.4
RPN11P43588 HAL5YJL165C 2568 nt6.33□□□□□ -1.4
RPN11P43588 HXT15YDL245C 1704 nt6.33□□□□□ -1.4
RPN11P43588 HXT16YJR158W 1704 nt6.33□□□□□ -1.4
RPN11P43588 ORM1YGR038W 669 nt6.32□□□□□ -1.4
RPN11P43588 MEU1YLR017W 1014 nt6.32□□□□□ -1.4
RPN11P43588 RRN10YBL025W 438 nt6.32□□□□□ -1.4
RPN11P43588 HEL1YKR017C 1656 nt6.31□□□□□ -1.4
RPN11P43588 FET4YMR319C 1659 nt6.31□□□□□ -1.4
RPN11P43588 YAL044W-AYAL044W-A 333 nt6.31□□□□□ -1.4
RPN11P43588 GPM3YOL056W 912 nt6.31□□□□□ -1.4
RPN11P43588 NTH2YBR001C 2343 nt6.31□□□□□ -1.4
RPN11P43588 RPT4YOR259C 1314 nt6.3□□□□□ -1.4
RPN11P43588 YHR145CYHR145C 357 nt6.3□□□□□ -1.4
RPN11P43588 YAR023CYAR023C 540 nt6.3□□□□□ -1.4
RPN11P43588 YNL134CYNL134C 1131 nt6.3□□□□□ -1.4
RPN11P43588 RPS19BYNL302C 435 nt6.3□□□□□ -1.4
RPN11P43588 ERG4YGL012W 1422 nt6.3□□□□□ -1.4
RPN11P43588 RSP5YER125W 2430 nt6.3□□□□□ -1.4
RPN11P43588 CCR4YAL021C 2514 nt6.3□□□□□ -1.4
RPN11P43588 HRP1YOL123W 1605 nt6.29□□□□□ -1.4
RPN11P43588 SLX5YDL013W 1860 nt6.29□□□□□ -1.4
RPN11P43588 CAB1YDR531W 1104 nt6.29□□□□□ -1.4
RPN11P43588 YAP1802YGR241C 1707 nt6.29□□□□□ -1.4
RPN11P43588 YNK1YKL067W 462 nt6.29□□□□□ -1.4
RPN11P43588 DBR1YKL149C 1218 nt6.29□□□□□ -1.4
RPN11P43588 ACP1YKL192C 378 nt6.29□□□□□ -1.4
RPN11P43588 snR19snR19 568 nt6.29□□□□□ -1.4
RPN11P43588 ATP1YBL099W 1638 nt6.28□□□□□ -1.4
RPN11P43588 SKY1YMR216C 2229 nt6.28□□□□□ -1.4
RPN11P43588 SPL2YHR136C 447 nt6.28□□□□□ -1.4
RPN11P43588 PSH1YOL054W 1221 nt6.28□□□□□ -1.4
RPN11P43588 SLD7YOR060C 774 nt6.28□□□□□ -1.4
RPN11P43588 NSE5YML023C 1671 nt6.28□□□□□ -1.4
RPN11P43588 YEF1YEL041W 1488 nt6.28□□□□□ -1.4
RPN11P43588 GFA1YKL104C 2154 nt6.27□□□□□ -1.41
RPN11P43588 GYP1YOR070C 1914 nt6.27□□□□□ -1.41
RPN11P43588 YEN1YER041W 2280 nt6.27□□□□□ -1.41
RPN11P43588 REI1YBR267W 1182 nt6.27□□□□□ -1.41
RPN11P43588 SNT2YGL131C 4212 nt6.27□□□□□ -1.41
RPN11P43588 MSB3YNL293W 1902 nt6.26□□□□□ -1.41
RPN11P43588 ATG20YDL113C 1923 nt6.25□□□□□ -1.41
RPN11P43588 NSG1YHR133C 876 nt6.25□□□□□ -1.41
RPN11P43588 UTP18YJL069C 1785 nt6.25□□□□□ -1.41
RPN11P43588 HIR1YBL008W 2523 nt6.25□□□□□ -1.41
RPN11P43588 ENP1YBR247C 1452 nt6.24□□□□□ -1.41
RPN11P43588 SCM3YDL139C 672 nt6.24□□□□□ -1.41
RPN11P43588 URE2YNL229C 1065 nt6.24□□□□□ -1.41
RPN11P43588 VPS4YPR173C 1314 nt6.24□□□□□ -1.41
RPN11P43588 GDA1YEL042W 1557 nt6.23□□□□□ -1.41
RPN11P43588 IDP1YDL066W 1287 nt6.23□□□□□ -1.41
RPN11P43588 YPL191CYPL191C 1083 nt6.23□□□□□ -1.41
RPN11P43588 THI4YGR144W 981 nt6.22□□□□□ -1.41
RPN11P43588 OAC1YKL120W 975 nt6.22□□□□□ -1.41
RPN11P43588 RFU1YLR073C 603 nt6.22□□□□□ -1.41
RPN11P43588 YLR364C-AYLR364C-A 123 nt6.22□□□□□ -1.41
RPN11P43588 GPA1YHR005C 1419 nt6.22□□□□□ -1.41
RPN11P43588 ASN2YGR124W 1719 nt6.22□□□□□ -1.41
RPN11P43588 ICL2YPR006C 1728 nt6.22□□□□□ -1.41
RPN11P43588 NAG1YGR031C-A 492 nt6.2□□□□□ -1.42
RPN11P43588 PRS1YKL181W 1284 nt6.2□□□□□ -1.42
RPN11P43588 MRPL20YKR085C 588 nt6.2□□□□□ -1.42
RPN11P43588 CUE5YOR042W 1236 nt6.2□□□□□ -1.42
RPN11P43588 RPL21BYPL079W 483 nt6.2□□□□□ -1.42
RPN11P43588 SPN1YPR133C 1233 nt6.2□□□□□ -1.42
RPN11P43588 PHO3YBR092C 1404 nt6.19□□□□□ -1.42
RPN11P43588 ATE1YGL017W 1512 nt6.19□□□□□ -1.42
RPN11P43588 RCK1YGL158W 1539 nt6.19□□□□□ -1.42
RPN11P43588 YOS9YDR057W 1629 nt6.18□□□□□ -1.42
RPN11P43588 SPR6YER115C 576 nt6.18□□□□□ -1.42
RPN11P43588 YHR140WYHR140W 720 nt6.18□□□□□ -1.42
RPN11P43588 YNL181WYNL181W 1224 nt6.18□□□□□ -1.42
RPN11P43588 TIP41YPR040W 1071 nt6.18□□□□□ -1.42
RPN11P43588 STB3YDR169C 1542 nt6.18□□□□□ -1.42
RPN11P43588 GUA1YMR217W 1578 nt6.18□□□□□ -1.42
RPN11P43588 YCR061WYCR061W 1896 nt6.17□□□□□ -1.42
RPN11P43588 GLN3YER040W 2193 nt6.17□□□□□ -1.42
RPN11P43588 YBL070CYBL070C 321 nt6.17□□□□□ -1.42
RPN11P43588 HST2YPL015C 1074 nt6.17□□□□□ -1.42
RPN11P43588 LPL1YOR059C 1353 nt6.17□□□□□ -1.42
RPN11P43588 YIR017W-AYIR017W-A 600 nt6.16□□□□□ -1.42
RPN11P43588 PRP2YNR011C 2631 nt6.16□□□□□ -1.42
RPN11P43588 RAD57YDR004W 1383 nt6.16□□□□□ -1.42
RPN11P43588 tL(UAG)JtL(UAG)J 82 nt6.15□□□□□ -1.42
RPN11P43588 tL(UAG)L1tL(UAG)L1 82 nt6.15□□□□□ -1.42
RPN11P43588 tL(UAG)L2tL(UAG)L2 82 nt6.15□□□□□ -1.42
RPN11P43588 MTM1YGR257C 1101 nt6.15□□□□□ -1.42
RPN11P43588 YLR317WYLR317W 435 nt6.15□□□□□ -1.42
RPN11P43588 YBL044WYBL044W 369 nt6.15□□□□□ -1.42
RPN11P43588 QDR1YIL120W 1692 nt6.14□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms