Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.21■□□□□ 0.83
CD40P25942 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CD40P25942 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD40P25942 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD40P25942 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.21■□□□□ 0.83
CD40P25942 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.21■□□□□ 0.83
CD40P25942 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.21■□□□□ 0.83
CD40P25942 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CD40P25942 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD40P25942 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD40P25942 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD40P25942 SLC6A10P-202ENST00000431994 2058 ntBASIC20.2■□□□□ 0.82
CD40P25942 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CD40P25942 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CD40P25942 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CD40P25942 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.19■□□□□ 0.82
CD40P25942 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
CD40P25942 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD40P25942 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD40P25942 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CD40P25942 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.19■□□□□ 0.82
CD40P25942 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CD40P25942 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD40P25942 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD40P25942 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.19■□□□□ 0.82
CD40P25942 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
CD40P25942 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD40P25942 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CD40P25942 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD40P25942 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD40P25942 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CD40P25942 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.18■□□□□ 0.82
CD40P25942 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.18■□□□□ 0.82
CD40P25942 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD40P25942 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.18■□□□□ 0.82
CD40P25942 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CD40P25942 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD40P25942 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD40P25942 MTDHP2-201ENST00000601468 714 ntBASIC20.17■□□□□ 0.82
CD40P25942 AC010997.5-201ENST00000609182 354 ntBASIC20.17■□□□□ 0.82
CD40P25942 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.17■□□□□ 0.82
CD40P25942 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD40P25942 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD40P25942 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD40P25942 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD40P25942 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD40P25942 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.16■□□□□ 0.82
CD40P25942 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD40P25942 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD40P25942 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.16■□□□□ 0.82
CD40P25942 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CD40P25942 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD40P25942 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CD40P25942 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD40P25942 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.15■□□□□ 0.82
CD40P25942 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD40P25942 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD40P25942 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.15■□□□□ 0.82
CD40P25942 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.15■□□□□ 0.82
CD40P25942 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.15■□□□□ 0.82
CD40P25942 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.15■□□□□ 0.82
CD40P25942 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD40P25942 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD40P25942 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.15■□□□□ 0.82
CD40P25942 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.15■□□□□ 0.82
CD40P25942 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CD40P25942 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD40P25942 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD40P25942 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD40P25942 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CD40P25942 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.13■□□□□ 0.81
CD40P25942 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.13■□□□□ 0.81
CD40P25942 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.13■□□□□ 0.81
CD40P25942 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD40P25942 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD40P25942 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.12■□□□□ 0.81
CD40P25942 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD40P25942 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD40P25942 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.11■□□□□ 0.81
CD40P25942 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD40P25942 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.11■□□□□ 0.81
CD40P25942 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.11■□□□□ 0.81
CD40P25942 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.11■□□□□ 0.81
CD40P25942 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.11■□□□□ 0.81
CD40P25942 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD40P25942 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD40P25942 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD40P25942 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD40P25942 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD40P25942 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD40P25942 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CD40P25942 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.1■□□□□ 0.81
CD40P25942 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.1■□□□□ 0.81
CD40P25942 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.1■□□□□ 0.81
CD40P25942 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.1■□□□□ 0.81
CD40P25942 MIR6724-1-201ENST00000616420 92 ntBASIC20.1■□□□□ 0.81
CD40P25942 MIR6724-2-201ENST00000616483 92 ntBASIC20.1■□□□□ 0.81
CD40P25942 MIR6089-201ENST00000616698 64 ntBASIC20.1■□□□□ 0.81
CD40P25942 MIR6724-4-201ENST00000617390 92 ntBASIC20.1■□□□□ 0.81
CD40P25942 MIR6724-3-201ENST00000622482 92 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms