Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PF4V1P10720 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PF4V1P10720 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.41■□□□□ 0.54
PF4V1P10720 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PF4V1P10720 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PF4V1P10720 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.41■□□□□ 0.54
PF4V1P10720 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.41■□□□□ 0.54
PF4V1P10720 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.41■□□□□ 0.54
PF4V1P10720 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PF4V1P10720 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.4■□□□□ 0.54
PF4V1P10720 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PF4V1P10720 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PF4V1P10720 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PF4V1P10720 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PF4V1P10720 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.4■□□□□ 0.54
PF4V1P10720 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PF4V1P10720 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PF4V1P10720 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.39■□□□□ 0.54
PF4V1P10720 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PF4V1P10720 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PF4V1P10720 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.39■□□□□ 0.53
PF4V1P10720 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PF4V1P10720 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PF4V1P10720 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PF4V1P10720 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.39■□□□□ 0.53
PF4V1P10720 AC120024.1-201ENST00000562672 995 ntBASIC18.39■□□□□ 0.53
PF4V1P10720 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PF4V1P10720 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PF4V1P10720 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PF4V1P10720 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.38■□□□□ 0.53
PF4V1P10720 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PF4V1P10720 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PF4V1P10720 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PF4V1P10720 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.38■□□□□ 0.53
PF4V1P10720 KRT16P3-201ENST00000439127 1283 ntBASIC18.38■□□□□ 0.53
PF4V1P10720 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PF4V1P10720 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PF4V1P10720 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PF4V1P10720 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PF4V1P10720 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PF4V1P10720 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PF4V1P10720 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.37■□□□□ 0.53
PF4V1P10720 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PF4V1P10720 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PF4V1P10720 TSPY9P-201ENST00000440215 945 ntBASIC18.37■□□□□ 0.53
PF4V1P10720 TSPY11P-201ENST00000442607 1045 ntBASIC18.37■□□□□ 0.53
PF4V1P10720 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.37■□□□□ 0.53
PF4V1P10720 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.37■□□□□ 0.53
PF4V1P10720 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PF4V1P10720 AC008406.3-201ENST00000620001 1374 ntBASIC18.37■□□□□ 0.53
PF4V1P10720 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PF4V1P10720 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.36■□□□□ 0.53
PF4V1P10720 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PF4V1P10720 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
PF4V1P10720 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.36■□□□□ 0.53
PF4V1P10720 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PF4V1P10720 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PF4V1P10720 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.36■□□□□ 0.53
PF4V1P10720 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.35■□□□□ 0.53
PF4V1P10720 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.35■□□□□ 0.53
PF4V1P10720 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.35■□□□□ 0.53
PF4V1P10720 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.35■□□□□ 0.53
PF4V1P10720 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.35■□□□□ 0.53
PF4V1P10720 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.35■□□□□ 0.53
PF4V1P10720 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 SLC6A10P-202ENST00000431994 2058 ntBASIC18.35■□□□□ 0.53
PF4V1P10720 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PF4V1P10720 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PF4V1P10720 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PF4V1P10720 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PF4V1P10720 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PF4V1P10720 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PF4V1P10720 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PF4V1P10720 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PF4V1P10720 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PF4V1P10720 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.33■□□□□ 0.52
PF4V1P10720 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PF4V1P10720 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.32■□□□□ 0.52
PF4V1P10720 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PF4V1P10720 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PF4V1P10720 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms