Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBP04435 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBP04435 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TCRBP04435 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TCRBP04435 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBP04435 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TCRBP04435 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TCRBP04435 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TCRBP04435 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TCRBP04435 LINC00526-201ENST00000581067 1875 ntBASIC19.85■□□□□ 0.77
TCRBP04435 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TCRBP04435 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBP04435 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TCRBP04435 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBP04435 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBP04435 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBP04435 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
TCRBP04435 C1orf229-201ENST00000623686 2258 ntBASIC19.84■□□□□ 0.77
TCRBP04435 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TCRBP04435 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBP04435 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
TCRBP04435 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBP04435 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBP04435 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBP04435 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBP04435 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBP04435 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBP04435 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBP04435 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBP04435 AC127496.7-201ENST00000625110 1798 ntBASIC19.83■□□□□ 0.76
TCRBP04435 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBP04435 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.82■□□□□ 0.76
TCRBP04435 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBP04435 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBP04435 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBP04435 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBP04435 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBP04435 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBP04435 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TCRBP04435 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBP04435 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TCRBP04435 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBP04435 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBP04435 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBP04435 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TCRBP04435 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBP04435 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBP04435 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
TCRBP04435 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TCRBP04435 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBP04435 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBP04435 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBP04435 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TCRBP04435 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TCRBP04435 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBP04435 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.79■□□□□ 0.76
TCRBP04435 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBP04435 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBP04435 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBP04435 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 AC007375.3-201ENST00000600936 2314 ntBASIC19.79■□□□□ 0.76
TCRBP04435 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBP04435 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBP04435 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.78■□□□□ 0.76
TCRBP04435 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBP04435 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBP04435 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBP04435 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TCRBP04435 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TCRBP04435 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBP04435 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBP04435 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBP04435 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBP04435 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBP04435 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TCRBP04435 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBP04435 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBP04435 AC005559.1-201ENST00000589661 871 ntBASIC19.77■□□□□ 0.76
TCRBP04435 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBP04435 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBP04435 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBP04435 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBP04435 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBP04435 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBP04435 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TCRBP04435 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms