Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL512631.2-201ENST00000604634 923 ntBASIC21.78■■□□□ 1.08
PDGFAP04085 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDGFAP04085 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDGFAP04085 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDGFAP04085 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.78■■□□□ 1.08
PDGFAP04085 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDGFAP04085 AC011551.1-201ENST00000614101 683 ntBASIC21.77■■□□□ 1.08
PDGFAP04085 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDGFAP04085 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.77■■□□□ 1.08
PDGFAP04085 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDGFAP04085 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDGFAP04085 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDGFAP04085 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDGFAP04085 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.76■■□□□ 1.07
PDGFAP04085 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDGFAP04085 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.76■■□□□ 1.07
PDGFAP04085 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.76■■□□□ 1.07
PDGFAP04085 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PDGFAP04085 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.76■■□□□ 1.07
PDGFAP04085 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PDGFAP04085 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDGFAP04085 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDGFAP04085 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.75■■□□□ 1.07
PDGFAP04085 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.75■■□□□ 1.07
PDGFAP04085 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDGFAP04085 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDGFAP04085 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.75■■□□□ 1.07
PDGFAP04085 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDGFAP04085 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDGFAP04085 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDGFAP04085 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.74■■□□□ 1.07
PDGFAP04085 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.74■■□□□ 1.07
PDGFAP04085 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.74■■□□□ 1.07
PDGFAP04085 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDGFAP04085 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDGFAP04085 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.73■■□□□ 1.07
PDGFAP04085 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDGFAP04085 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDGFAP04085 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDGFAP04085 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDGFAP04085 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDGFAP04085 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PDGFAP04085 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.72■■□□□ 1.07
PDGFAP04085 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.72■■□□□ 1.07
PDGFAP04085 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PDGFAP04085 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PDGFAP04085 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFAP04085 AF131216.4-201ENST00000638924 1588 ntBASIC21.71■■□□□ 1.07
PDGFAP04085 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFAP04085 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDGFAP04085 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.71■■□□□ 1.07
PDGFAP04085 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.71■■□□□ 1.07
PDGFAP04085 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.71■■□□□ 1.07
PDGFAP04085 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.71■■□□□ 1.07
PDGFAP04085 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDGFAP04085 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDGFAP04085 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PDGFAP04085 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.7■■□□□ 1.06
PDGFAP04085 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFAP04085 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PDGFAP04085 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFAP04085 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFAP04085 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFAP04085 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFAP04085 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFAP04085 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFAP04085 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFAP04085 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFAP04085 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDGFAP04085 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.69■■□□□ 1.06
PDGFAP04085 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFAP04085 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFAP04085 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFAP04085 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.68■■□□□ 1.06
PDGFAP04085 AC133561.4-201ENST00000566112 224 ntBASIC21.68■■□□□ 1.06
PDGFAP04085 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFAP04085 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFAP04085 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFAP04085 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFAP04085 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFAP04085 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFAP04085 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFAP04085 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFAP04085 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFAP04085 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFAP04085 ZNRF2P3-201ENST00000424200 374 ntBASIC21.66■■□□□ 1.06
PDGFAP04085 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.66■■□□□ 1.06
PDGFAP04085 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFAP04085 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFAP04085 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFAP04085 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PDGFAP04085 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFAP04085 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFAP04085 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFAP04085 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFAP04085 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.65■■□□□ 1.06
PDGFAP04085 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFAP04085 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.65■■□□□ 1.06
PDGFAP04085 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFAP04085 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms