Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
MT-ND3P03897 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MT-ND3P03897 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.64■■□□□ 1.37
MT-ND3P03897 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MT-ND3P03897 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
MT-ND3P03897 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MT-ND3P03897 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MT-ND3P03897 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MT-ND3P03897 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
MT-ND3P03897 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
MT-ND3P03897 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MT-ND3P03897 AC012676.1-201ENST00000574705 1949 ntBASIC23.63■■□□□ 1.37
MT-ND3P03897 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
MT-ND3P03897 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-ND3P03897 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.62■■□□□ 1.37
MT-ND3P03897 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-ND3P03897 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.61■■□□□ 1.37
MT-ND3P03897 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.61■■□□□ 1.37
MT-ND3P03897 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND3P03897 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.61■■□□□ 1.37
MT-ND3P03897 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND3P03897 ATP5G2P3-201ENST00000429083 425 ntBASIC23.61■■□□□ 1.37
MT-ND3P03897 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND3P03897 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
MT-ND3P03897 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND3P03897 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND3P03897 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND3P03897 AC004987.1-201ENST00000428627 508 ntBASIC23.6■■□□□ 1.37
MT-ND3P03897 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND3P03897 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND3P03897 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.59■■□□□ 1.37
MT-ND3P03897 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.59■■□□□ 1.37
MT-ND3P03897 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.59■■□□□ 1.37
MT-ND3P03897 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MT-ND3P03897 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.59■■□□□ 1.37
MT-ND3P03897 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-ND3P03897 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-ND3P03897 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-ND3P03897 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
MT-ND3P03897 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.59■■□□□ 1.37
MT-ND3P03897 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.58■■□□□ 1.37
MT-ND3P03897 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-ND3P03897 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.58■■□□□ 1.37
MT-ND3P03897 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-ND3P03897 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MT-ND3P03897 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
MT-ND3P03897 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
MT-ND3P03897 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.58■■□□□ 1.37
MT-ND3P03897 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-ND3P03897 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
MT-ND3P03897 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
MT-ND3P03897 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-ND3P03897 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-ND3P03897 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-ND3P03897 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
MT-ND3P03897 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
MT-ND3P03897 AC133552.2-201ENST00000619106 1032 ntBASIC23.57■■□□□ 1.36
MT-ND3P03897 AC004812.2-201ENST00000611079 2094 ntBASIC23.56■■□□□ 1.36
MT-ND3P03897 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-ND3P03897 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-ND3P03897 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-ND3P03897 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 AC068473.5-201ENST00000616428 2072 ntBASIC23.56■■□□□ 1.36
MT-ND3P03897 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
MT-ND3P03897 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-ND3P03897 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND3P03897 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND3P03897 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND3P03897 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.55■■□□□ 1.36
MT-ND3P03897 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.55■■□□□ 1.36
MT-ND3P03897 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND3P03897 AC025884.2-201ENST00000553429 711 ntBASIC23.55■■□□□ 1.36
MT-ND3P03897 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND3P03897 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-ND3P03897 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.55■■□□□ 1.36
MT-ND3P03897 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND3P03897 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND3P03897 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND3P03897 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND3P03897 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND3P03897 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.54■■□□□ 1.36
MT-ND3P03897 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.54■■□□□ 1.36
MT-ND3P03897 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
MT-ND3P03897 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.54■■□□□ 1.36
MT-ND3P03897 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MT-ND3P03897 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND3P03897 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND3P03897 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND3P03897 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND3P03897 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND3P03897 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND3P03897 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND3P03897 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.53■■□□□ 1.36
MT-ND3P03897 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MT-ND3P03897 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms