Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1P01909 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 MIR3665-201ENST00000578708 105 ntBASIC17.49■□□□□ 0.39
HLA-DQA1P01909 AP006261.1-201ENST00000584783 668 ntBASIC17.49■□□□□ 0.39
HLA-DQA1P01909 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1P01909 AC127496.7-201ENST00000625110 1798 ntBASIC17.48■□□□□ 0.39
HLA-DQA1P01909 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1P01909 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 DUX4L28-201ENST00000623687 678 ntBASIC17.47■□□□□ 0.39
HLA-DQA1P01909 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1P01909 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DQA1P01909 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1P01909 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1P01909 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.46■□□□□ 0.38
HLA-DQA1P01909 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1P01909 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 AL162393.1-201ENST00000437852 946 ntBASIC17.44■□□□□ 0.38
HLA-DQA1P01909 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA1P01909 C1orf229-201ENST00000623686 2258 ntBASIC17.44■□□□□ 0.38
HLA-DQA1P01909 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 LINC00526-201ENST00000581067 1875 ntBASIC17.43■□□□□ 0.38
HLA-DQA1P01909 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQA1P01909 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQA1P01909 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DQA1P01909 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms