Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFBP01127 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFBP01127 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFBP01127 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PDGFBP01127 DRD5P2-201ENST00000421395 2012 ntBASIC23.86■■□□□ 1.41
PDGFBP01127 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.86■■□□□ 1.41
PDGFBP01127 AC027682.1-201ENST00000562846 899 ntBASIC23.86■■□□□ 1.41
PDGFBP01127 AL137784.2-201ENST00000607332 1000 ntBASIC23.86■■□□□ 1.41
PDGFBP01127 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PDGFBP01127 SERBP1P1-201ENST00000396021 1160 ntBASIC23.85■■□□□ 1.41
PDGFBP01127 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.85■■□□□ 1.41
PDGFBP01127 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.85■■□□□ 1.41
PDGFBP01127 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.85■■□□□ 1.41
PDGFBP01127 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.85■■□□□ 1.41
PDGFBP01127 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PDGFBP01127 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFBP01127 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PDGFBP01127 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PDGFBP01127 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFBP01127 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFBP01127 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.84■■□□□ 1.41
PDGFBP01127 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFBP01127 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PDGFBP01127 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFBP01127 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.84■■□□□ 1.41
PDGFBP01127 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.84■■□□□ 1.41
PDGFBP01127 AC092437.1-201ENST00000624794 1048 ntBASIC23.84■■□□□ 1.41
PDGFBP01127 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PDGFBP01127 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFBP01127 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFBP01127 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.83■■□□□ 1.4
PDGFBP01127 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDGFBP01127 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFBP01127 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFBP01127 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFBP01127 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.82■■□□□ 1.4
PDGFBP01127 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.82■■□□□ 1.4
PDGFBP01127 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.82■■□□□ 1.4
PDGFBP01127 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.82■■□□□ 1.4
PDGFBP01127 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.82■■□□□ 1.4
PDGFBP01127 AC099791.1-201ENST00000416440 715 ntBASIC23.81■■□□□ 1.4
PDGFBP01127 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.81■■□□□ 1.4
PDGFBP01127 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFBP01127 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFBP01127 FOXO3B-201ENST00000395675 1928 ntBASIC23.8■■□□□ 1.4
PDGFBP01127 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFBP01127 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFBP01127 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PDGFBP01127 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.8■■□□□ 1.4
PDGFBP01127 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFBP01127 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFBP01127 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.8■■□□□ 1.4
PDGFBP01127 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.8■■□□□ 1.4
PDGFBP01127 ABCB10P1-201ENST00000614297 2181 ntBASIC23.8■■□□□ 1.4
PDGFBP01127 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFBP01127 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFBP01127 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFBP01127 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFBP01127 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFBP01127 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFBP01127 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.79■■□□□ 1.4
PDGFBP01127 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFBP01127 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFBP01127 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFBP01127 KRT18P5-201ENST00000436075 1291 ntBASIC23.78■■□□□ 1.4
PDGFBP01127 AC034268.1-201ENST00000441047 882 ntBASIC23.78■■□□□ 1.4
PDGFBP01127 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.78■■□□□ 1.4
PDGFBP01127 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.78■■□□□ 1.4
PDGFBP01127 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
PDGFBP01127 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFBP01127 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PDGFBP01127 ID1-201ENST00000376105 1233 ntBASIC23.77■■□□□ 1.4
PDGFBP01127 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.77■■□□□ 1.4
PDGFBP01127 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.77■■□□□ 1.4
PDGFBP01127 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.77■■□□□ 1.4
PDGFBP01127 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFBP01127 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFBP01127 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.77■■□□□ 1.4
PDGFBP01127 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFBP01127 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PDGFBP01127 LINC01003-201ENST00000564834 1764 ntBASIC23.76■■□□□ 1.39
PDGFBP01127 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFBP01127 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFBP01127 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.76■■□□□ 1.39
PDGFBP01127 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.76■■□□□ 1.39
PDGFBP01127 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PDGFBP01127 AL031602.1-201ENST00000633169 911 ntBASIC23.76■■□□□ 1.39
PDGFBP01127 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFBP01127 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.76■■□□□ 1.39
PDGFBP01127 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFBP01127 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
PDGFBP01127 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFBP01127 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.75■■□□□ 1.39
PDGFBP01127 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.75■■□□□ 1.39
PDGFBP01127 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.75■■□□□ 1.39
PDGFBP01127 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.75■■□□□ 1.39
PDGFBP01127 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.75■■□□□ 1.39
PDGFBP01127 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PDGFBP01127 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFBP01127 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms