Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SOD1P00441 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.16■■□□□ 1.3
SOD1P00441 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOD1P00441 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOD1P00441 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOD1P00441 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SOD1P00441 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOD1P00441 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.15■■□□□ 1.3
SOD1P00441 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.15■■□□□ 1.3
SOD1P00441 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.15■■□□□ 1.3
SOD1P00441 MIR4787-201ENST00000607364 84 ntBASIC23.15■■□□□ 1.3
SOD1P00441 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SOD1P00441 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SOD1P00441 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SOD1P00441 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SOD1P00441 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
SOD1P00441 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SOD1P00441 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.14■■□□□ 1.29
SOD1P00441 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.14■■□□□ 1.29
SOD1P00441 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.14■■□□□ 1.29
SOD1P00441 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
SOD1P00441 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SOD1P00441 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
SOD1P00441 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SOD1P00441 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SOD1P00441 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SOD1P00441 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.13■■□□□ 1.29
SOD1P00441 KRT125P-201ENST00000546827 989 ntBASIC23.13■■□□□ 1.29
SOD1P00441 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SOD1P00441 AC022211.4-201ENST00000625094 2161 ntBASIC23.13■■□□□ 1.29
SOD1P00441 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.12■■□□□ 1.29
SOD1P00441 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SOD1P00441 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SOD1P00441 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SOD1P00441 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.12■■□□□ 1.29
SOD1P00441 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SOD1P00441 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SOD1P00441 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SOD1P00441 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOD1P00441 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.11■■□□□ 1.29
SOD1P00441 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.11■■□□□ 1.29
SOD1P00441 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.11■■□□□ 1.29
SOD1P00441 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.11■■□□□ 1.29
SOD1P00441 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SOD1P00441 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOD1P00441 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.11■■□□□ 1.29
SOD1P00441 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.1■■□□□ 1.29
SOD1P00441 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 AC020928.2-201ENST00000588717 2197 ntBASIC23.1■■□□□ 1.29
SOD1P00441 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.1■■□□□ 1.29
SOD1P00441 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.1■■□□□ 1.29
SOD1P00441 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.1■■□□□ 1.29
SOD1P00441 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.1■■□□□ 1.29
SOD1P00441 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.1■■□□□ 1.29
SOD1P00441 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOD1P00441 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.09■■□□□ 1.29
SOD1P00441 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.09■■□□□ 1.29
SOD1P00441 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SOD1P00441 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.09■■□□□ 1.29
SOD1P00441 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOD1P00441 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOD1P00441 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOD1P00441 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.08■■□□□ 1.29
SOD1P00441 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOD1P00441 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
SOD1P00441 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.08■■□□□ 1.29
SOD1P00441 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOD1P00441 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.08■■□□□ 1.29
SOD1P00441 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SOD1P00441 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SOD1P00441 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SOD1P00441 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SOD1P00441 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.07■■□□□ 1.28
SOD1P00441 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.07■■□□□ 1.28
SOD1P00441 UNC93B8-201ENST00000511903 705 ntBASIC23.07■■□□□ 1.28
SOD1P00441 AC092028.1-203ENST00000608262 953 ntBASIC23.07■■□□□ 1.28
SOD1P00441 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SOD1P00441 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SOD1P00441 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SOD1P00441 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SOD1P00441 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SOD1P00441 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.06■■□□□ 1.28
SOD1P00441 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SOD1P00441 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SOD1P00441 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SOD1P00441 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.05■■□□□ 1.28
SOD1P00441 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.05■■□□□ 1.28
SOD1P00441 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SOD1P00441 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
SOD1P00441 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
SOD1P00441 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms