Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ALDH1A1P00352 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
ALDH1A1P00352 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ALDH1A1P00352 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.12■■□□□ 1.93
ALDH1A1P00352 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.12■■□□□ 1.93
ALDH1A1P00352 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.12■■□□□ 1.93
ALDH1A1P00352 AC090877.2-201ENST00000558441 1738 ntBASIC27.12■■□□□ 1.93
ALDH1A1P00352 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ALDH1A1P00352 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ALDH1A1P00352 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ALDH1A1P00352 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ALDH1A1P00352 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ALDH1A1P00352 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ALDH1A1P00352 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ALDH1A1P00352 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
ALDH1A1P00352 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ALDH1A1P00352 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ALDH1A1P00352 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.08■■□□□ 1.93
ALDH1A1P00352 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
ALDH1A1P00352 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
ALDH1A1P00352 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ALDH1A1P00352 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.07■■□□□ 1.92
ALDH1A1P00352 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ALDH1A1P00352 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.07■■□□□ 1.92
ALDH1A1P00352 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.07■■□□□ 1.92
ALDH1A1P00352 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ALDH1A1P00352 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ALDH1A1P00352 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
ALDH1A1P00352 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
ALDH1A1P00352 AP004609.3-201ENST00000610705 1884 ntBASIC27.06■■□□□ 1.92
ALDH1A1P00352 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ALDH1A1P00352 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
ALDH1A1P00352 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
ALDH1A1P00352 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.06■■□□□ 1.92
ALDH1A1P00352 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ALDH1A1P00352 AC005703.6-201ENST00000623265 1329 ntBASIC27.06■■□□□ 1.92
ALDH1A1P00352 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
ALDH1A1P00352 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ALDH1A1P00352 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
ALDH1A1P00352 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.05■■□□□ 1.92
ALDH1A1P00352 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.05■■□□□ 1.92
ALDH1A1P00352 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
ALDH1A1P00352 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ALDH1A1P00352 JTB-203ENST00000368589 1216 ntTSL 2 BASIC27.04■■□□□ 1.92
ALDH1A1P00352 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
ALDH1A1P00352 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.04■■□□□ 1.92
ALDH1A1P00352 AL138724.1-201ENST00000606771 1088 ntBASIC27.04■■□□□ 1.92
ALDH1A1P00352 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ALDH1A1P00352 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
ALDH1A1P00352 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ALDH1A1P00352 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ALDH1A1P00352 AC011298.3-201ENST00000615796 283 ntBASIC27.03■■□□□ 1.92
ALDH1A1P00352 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.02■■□□□ 1.92
ALDH1A1P00352 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
ALDH1A1P00352 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ALDH1A1P00352 SERBP1P1-201ENST00000396021 1160 ntBASIC27.02■■□□□ 1.92
ALDH1A1P00352 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.02■■□□□ 1.92
ALDH1A1P00352 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
ALDH1A1P00352 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.01■■□□□ 1.91
ALDH1A1P00352 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.01■■□□□ 1.91
ALDH1A1P00352 AC008764.7-201ENST00000593779 1081 ntBASIC27.01■■□□□ 1.91
ALDH1A1P00352 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.01■■□□□ 1.91
ALDH1A1P00352 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.01■■□□□ 1.91
ALDH1A1P00352 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.01■■□□□ 1.91
ALDH1A1P00352 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27■■□□□ 1.91
ALDH1A1P00352 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ALDH1A1P00352 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27■■□□□ 1.91
ALDH1A1P00352 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27■■□□□ 1.91
ALDH1A1P00352 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27■■□□□ 1.91
ALDH1A1P00352 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
ALDH1A1P00352 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27■■□□□ 1.91
ALDH1A1P00352 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27■■□□□ 1.91
ALDH1A1P00352 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.99■■□□□ 1.91
ALDH1A1P00352 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ALDH1A1P00352 AC034268.1-201ENST00000441047 882 ntBASIC26.99■■□□□ 1.91
ALDH1A1P00352 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.99■■□□□ 1.91
ALDH1A1P00352 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ALDH1A1P00352 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.99■■□□□ 1.91
ALDH1A1P00352 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ALDH1A1P00352 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ALDH1A1P00352 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ALDH1A1P00352 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.98■■□□□ 1.91
ALDH1A1P00352 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ALDH1A1P00352 AL137784.2-201ENST00000607332 1000 ntBASIC26.98■■□□□ 1.91
ALDH1A1P00352 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ALDH1A1P00352 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ALDH1A1P00352 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ALDH1A1P00352 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ALDH1A1P00352 AC099791.1-201ENST00000416440 715 ntBASIC26.97■■□□□ 1.91
ALDH1A1P00352 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.97■■□□□ 1.91
ALDH1A1P00352 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.97■■□□□ 1.91
ALDH1A1P00352 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ALDH1A1P00352 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ALDH1A1P00352 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ALDH1A1P00352 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.96■■□□□ 1.91
ALDH1A1P00352 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.96■■□□□ 1.91
ALDH1A1P00352 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.96■■□□□ 1.91
ALDH1A1P00352 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.96■■□□□ 1.91
ALDH1A1P00352 AC022517.1-201ENST00000592429 346 ntBASIC26.96■■□□□ 1.91
ALDH1A1P00352 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 312.4 ms