Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTN3O95197 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.62■■□□□ 1.53
RTN3O95197 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTN3O95197 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.62■■□□□ 1.53
RTN3O95197 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.62■■□□□ 1.53
RTN3O95197 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
RTN3O95197 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTN3O95197 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RTN3O95197 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.61■■□□□ 1.53
RTN3O95197 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTN3O95197 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTN3O95197 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTN3O95197 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTN3O95197 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RTN3O95197 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.6■■□□□ 1.53
RTN3O95197 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.6■■□□□ 1.53
RTN3O95197 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.6■■□□□ 1.53
RTN3O95197 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTN3O95197 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.6■■□□□ 1.53
RTN3O95197 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
RTN3O95197 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
RTN3O95197 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTN3O95197 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.59■■□□□ 1.53
RTN3O95197 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTN3O95197 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
RTN3O95197 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTN3O95197 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTN3O95197 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RTN3O95197 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTN3O95197 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTN3O95197 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTN3O95197 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
RTN3O95197 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RTN3O95197 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
RTN3O95197 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.57■■□□□ 1.52
RTN3O95197 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTN3O95197 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTN3O95197 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.56■■□□□ 1.52
RTN3O95197 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTN3O95197 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTN3O95197 AL356441.2-201ENST00000443009 864 ntBASIC24.56■■□□□ 1.52
RTN3O95197 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.56■■□□□ 1.52
RTN3O95197 AC092028.1-203ENST00000608262 953 ntBASIC24.56■■□□□ 1.52
RTN3O95197 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RTN3O95197 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
RTN3O95197 SLC6A10P-202ENST00000431994 2058 ntBASIC24.56■■□□□ 1.52
RTN3O95197 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTN3O95197 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTN3O95197 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTN3O95197 AF131216.4-201ENST00000638924 1588 ntBASIC24.55■■□□□ 1.52
RTN3O95197 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTN3O95197 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.55■■□□□ 1.52
RTN3O95197 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.55■■□□□ 1.52
RTN3O95197 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.55■■□□□ 1.52
RTN3O95197 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.55■■□□□ 1.52
RTN3O95197 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RTN3O95197 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTN3O95197 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.55■■□□□ 1.52
RTN3O95197 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTN3O95197 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTN3O95197 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTN3O95197 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
RTN3O95197 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.54■■□□□ 1.52
RTN3O95197 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTN3O95197 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
RTN3O95197 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.54■■□□□ 1.52
RTN3O95197 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.53■■□□□ 1.52
RTN3O95197 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.53■■□□□ 1.52
RTN3O95197 UNC93B8-201ENST00000511903 705 ntBASIC24.53■■□□□ 1.52
RTN3O95197 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.53■■□□□ 1.52
RTN3O95197 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.53■■□□□ 1.52
RTN3O95197 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
RTN3O95197 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTN3O95197 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTN3O95197 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTN3O95197 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.51■■□□□ 1.51
RTN3O95197 TSPY9P-201ENST00000440215 945 ntBASIC24.51■■□□□ 1.51
RTN3O95197 TSPY11P-201ENST00000442607 1045 ntBASIC24.51■■□□□ 1.51
RTN3O95197 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
RTN3O95197 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTN3O95197 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTN3O95197 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RTN3O95197 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTN3O95197 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTN3O95197 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.5■■□□□ 1.51
RTN3O95197 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.5■■□□□ 1.51
RTN3O95197 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.5■■□□□ 1.51
RTN3O95197 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RTN3O95197 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.5■■□□□ 1.51
RTN3O95197 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTN3O95197 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.5■■□□□ 1.51
RTN3O95197 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.5■■□□□ 1.51
RTN3O95197 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTN3O95197 KRT16P3-201ENST00000439127 1283 ntBASIC24.49■■□□□ 1.51
RTN3O95197 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.49■■□□□ 1.51
RTN3O95197 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.49■■□□□ 1.51
RTN3O95197 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTN3O95197 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTN3O95197 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.48■■□□□ 1.51
RTN3O95197 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms