Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 FOXO3B-201ENST00000395675 1928 ntBASIC20.41■□□□□ 0.86
SMPD2O60906 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.41■□□□□ 0.86
SMPD2O60906 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD2O60906 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMPD2O60906 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMPD2O60906 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.41■□□□□ 0.86
SMPD2O60906 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD2O60906 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD2O60906 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD2O60906 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD2O60906 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.4■□□□□ 0.86
SMPD2O60906 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.4■□□□□ 0.86
SMPD2O60906 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMPD2O60906 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.4■□□□□ 0.86
SMPD2O60906 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMPD2O60906 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMPD2O60906 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMPD2O60906 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD2O60906 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.39■□□□□ 0.85
SMPD2O60906 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMPD2O60906 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.39■□□□□ 0.85
SMPD2O60906 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
SMPD2O60906 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD2O60906 AC020928.2-201ENST00000588717 2197 ntBASIC20.38■□□□□ 0.85
SMPD2O60906 SLC6A10P-202ENST00000431994 2058 ntBASIC20.38■□□□□ 0.85
SMPD2O60906 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMPD2O60906 AC120024.1-201ENST00000562672 995 ntBASIC20.38■□□□□ 0.85
SMPD2O60906 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.38■□□□□ 0.85
SMPD2O60906 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMPD2O60906 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD2O60906 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.37■□□□□ 0.85
SMPD2O60906 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.37■□□□□ 0.85
SMPD2O60906 AC021242.3-201ENST00000607598 1377 ntBASIC20.37■□□□□ 0.85
SMPD2O60906 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.37■□□□□ 0.85
SMPD2O60906 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMPD2O60906 MIR638-201ENST00000385237 100 ntBASIC20.37■□□□□ 0.85
SMPD2O60906 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.37■□□□□ 0.85
SMPD2O60906 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD2O60906 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMPD2O60906 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD2O60906 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMPD2O60906 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD2O60906 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD2O60906 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD2O60906 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD2O60906 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.36■□□□□ 0.85
SMPD2O60906 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.36■□□□□ 0.85
SMPD2O60906 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.36■□□□□ 0.85
SMPD2O60906 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.36■□□□□ 0.85
SMPD2O60906 AL139246.5-201ENST00000606645 996 ntBASIC20.36■□□□□ 0.85
SMPD2O60906 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.36■□□□□ 0.85
SMPD2O60906 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMPD2O60906 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SMPD2O60906 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SMPD2O60906 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.35■□□□□ 0.85
SMPD2O60906 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SMPD2O60906 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD2O60906 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMPD2O60906 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMPD2O60906 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.34■□□□□ 0.85
SMPD2O60906 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.34■□□□□ 0.85
SMPD2O60906 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.34■□□□□ 0.85
SMPD2O60906 AC092028.1-203ENST00000608262 953 ntBASIC20.34■□□□□ 0.85
SMPD2O60906 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.34■□□□□ 0.85
SMPD2O60906 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.34■□□□□ 0.85
SMPD2O60906 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD2O60906 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD2O60906 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD2O60906 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
SMPD2O60906 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD2O60906 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.33■□□□□ 0.85
SMPD2O60906 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SMPD2O60906 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMPD2O60906 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMPD2O60906 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SMPD2O60906 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.32■□□□□ 0.84
SMPD2O60906 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD2O60906 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.32■□□□□ 0.84
SMPD2O60906 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.32■□□□□ 0.84
SMPD2O60906 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.32■□□□□ 0.84
SMPD2O60906 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms