Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCN1O60741 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCN1O60741 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.66■■□□□ 1.06
HCN1O60741 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.66■■□□□ 1.06
HCN1O60741 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HCN1O60741 AC022616.5-201ENST00000518796 181 ntBASIC21.66■■□□□ 1.06
HCN1O60741 AC103724.3-201ENST00000564481 992 ntBASIC21.66■■□□□ 1.06
HCN1O60741 AL031848.2-201ENST00000607670 837 ntBASIC21.66■■□□□ 1.06
HCN1O60741 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
HCN1O60741 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HCN1O60741 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 AC009299.2-201ENST00000482477 511 ntBASIC21.65■■□□□ 1.06
HCN1O60741 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.65■■□□□ 1.06
HCN1O60741 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HCN1O60741 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HCN1O60741 AC097639.1-201ENST00000565519 1891 ntBASIC21.64■■□□□ 1.06
HCN1O60741 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
HCN1O60741 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HCN1O60741 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HCN1O60741 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HCN1O60741 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.64■■□□□ 1.05
HCN1O60741 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.64■■□□□ 1.05
HCN1O60741 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HCN1O60741 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.64■■□□□ 1.05
HCN1O60741 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HCN1O60741 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HCN1O60741 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HCN1O60741 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HCN1O60741 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.63■■□□□ 1.05
HCN1O60741 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCN1O60741 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HCN1O60741 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.63■■□□□ 1.05
HCN1O60741 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HCN1O60741 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HCN1O60741 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
HCN1O60741 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCN1O60741 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HCN1O60741 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.62■■□□□ 1.05
HCN1O60741 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HCN1O60741 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCN1O60741 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCN1O60741 AL139125.2-201ENST00000623134 1869 ntBASIC21.61■■□□□ 1.05
HCN1O60741 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.61■■□□□ 1.05
HCN1O60741 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCN1O60741 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCN1O60741 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.61■■□□□ 1.05
HCN1O60741 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HCN1O60741 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HCN1O60741 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCN1O60741 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HCN1O60741 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HCN1O60741 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
HCN1O60741 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCN1O60741 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCN1O60741 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.6■■□□□ 1.05
HCN1O60741 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCN1O60741 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HCN1O60741 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HCN1O60741 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCN1O60741 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.6■■□□□ 1.05
HCN1O60741 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.59■■□□□ 1.05
HCN1O60741 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCN1O60741 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HCN1O60741 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCN1O60741 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.59■■□□□ 1.05
HCN1O60741 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HCN1O60741 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.58■■□□□ 1.05
HCN1O60741 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HCN1O60741 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HCN1O60741 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HCN1O60741 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HCN1O60741 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.57■■□□□ 1.04
HCN1O60741 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.57■■□□□ 1.04
HCN1O60741 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.57■■□□□ 1.04
HCN1O60741 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCN1O60741 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.56■■□□□ 1.04
HCN1O60741 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.56■■□□□ 1.04
HCN1O60741 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HCN1O60741 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCN1O60741 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HCN1O60741 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HCN1O60741 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms