Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCNT1O60563 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCNT1O60563 AC011551.1-201ENST00000614101 683 ntBASIC26.58■■□□□ 1.85
CCNT1O60563 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.58■■□□□ 1.85
CCNT1O60563 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.58■■□□□ 1.85
CCNT1O60563 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.58■■□□□ 1.84
CCNT1O60563 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCNT1O60563 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.57■■□□□ 1.84
CCNT1O60563 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CCNT1O60563 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCNT1O60563 KRT18P24-201ENST00000344739 1156 ntBASIC26.57■■□□□ 1.84
CCNT1O60563 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.57■■□□□ 1.84
CCNT1O60563 THA1P-201ENST00000590384 1145 ntBASIC26.57■■□□□ 1.84
CCNT1O60563 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.57■■□□□ 1.84
CCNT1O60563 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CCNT1O60563 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCNT1O60563 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CCNT1O60563 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.57■■□□□ 1.84
CCNT1O60563 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CCNT1O60563 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.55■■□□□ 1.84
CCNT1O60563 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.55■■□□□ 1.84
CCNT1O60563 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCNT1O60563 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.55■■□□□ 1.84
CCNT1O60563 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
CCNT1O60563 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCNT1O60563 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNT1O60563 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.54■■□□□ 1.84
CCNT1O60563 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.54■■□□□ 1.84
CCNT1O60563 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.54■■□□□ 1.84
CCNT1O60563 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNT1O60563 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNT1O60563 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNT1O60563 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
CCNT1O60563 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNT1O60563 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNT1O60563 AL031848.2-201ENST00000607670 837 ntBASIC26.53■■□□□ 1.84
CCNT1O60563 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNT1O60563 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCNT1O60563 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCNT1O60563 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCNT1O60563 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCNT1O60563 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.51■■□□□ 1.84
CCNT1O60563 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.51■■□□□ 1.83
CCNT1O60563 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CCNT1O60563 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNT1O60563 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCNT1O60563 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.5■■□□□ 1.83
CCNT1O60563 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCNT1O60563 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNT1O60563 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNT1O60563 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNT1O60563 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCNT1O60563 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCNT1O60563 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNT1O60563 MIR4281-201ENST00000580852 62 ntBASIC26.48■■□□□ 1.83
CCNT1O60563 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.48■■□□□ 1.83
CCNT1O60563 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNT1O60563 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNT1O60563 HLA-L-211ENST00000482052 1765 ntBASIC26.48■■□□□ 1.83
CCNT1O60563 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCNT1O60563 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNT1O60563 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNT1O60563 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
CCNT1O60563 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNT1O60563 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.47■■□□□ 1.83
CCNT1O60563 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.47■■□□□ 1.83
CCNT1O60563 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.47■■□□□ 1.83
CCNT1O60563 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNT1O60563 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNT1O60563 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CCNT1O60563 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.46■■□□□ 1.83
CCNT1O60563 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNT1O60563 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNT1O60563 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.46■■□□□ 1.83
CCNT1O60563 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNT1O60563 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNT1O60563 AC135731.1-201ENST00000569415 2548 ntBASIC26.45■■□□□ 1.83
CCNT1O60563 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
CCNT1O60563 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.45■■□□□ 1.82
CCNT1O60563 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
CCNT1O60563 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.45■■□□□ 1.82
CCNT1O60563 AL139125.2-201ENST00000623134 1869 ntBASIC26.45■■□□□ 1.82
CCNT1O60563 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.44■■□□□ 1.82
CCNT1O60563 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNT1O60563 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNT1O60563 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms