Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDE6DO43924 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDE6DO43924 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDE6DO43924 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 EP400NL-214ENST00000641289 2402 ntBASIC18.06■□□□□ 0.48
PDE6DO43924 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.06■□□□□ 0.48
PDE6DO43924 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDE6DO43924 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDE6DO43924 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.06■□□□□ 0.48
PDE6DO43924 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6DO43924 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6DO43924 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6DO43924 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6DO43924 AC097358.2-201ENST00000607541 1159 ntBASIC18.05■□□□□ 0.48
PDE6DO43924 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDE6DO43924 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6DO43924 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6DO43924 MIR6089-201ENST00000616698 64 ntBASIC18.04■□□□□ 0.48
PDE6DO43924 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6DO43924 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDE6DO43924 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDE6DO43924 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6DO43924 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6DO43924 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6DO43924 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6DO43924 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6DO43924 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDE6DO43924 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.03■□□□□ 0.48
PDE6DO43924 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6DO43924 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
PDE6DO43924 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6DO43924 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6DO43924 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6DO43924 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6DO43924 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDE6DO43924 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6DO43924 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.02■□□□□ 0.48
PDE6DO43924 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.02■□□□□ 0.48
PDE6DO43924 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6DO43924 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6DO43924 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6DO43924 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
PDE6DO43924 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6DO43924 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDE6DO43924 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6DO43924 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.01■□□□□ 0.47
PDE6DO43924 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6DO43924 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDE6DO43924 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6DO43924 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6DO43924 AC127496.7-201ENST00000625110 1798 ntBASIC18.01■□□□□ 0.47
PDE6DO43924 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDE6DO43924 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6DO43924 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6DO43924 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.01■□□□□ 0.47
PDE6DO43924 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18■□□□□ 0.47
PDE6DO43924 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDE6DO43924 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDE6DO43924 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6DO43924 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6DO43924 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6DO43924 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDE6DO43924 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6DO43924 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6DO43924 HNRNPLP2-201ENST00000568980 1570 ntBASIC18■□□□□ 0.47
PDE6DO43924 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PDE6DO43924 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.99■□□□□ 0.47
PDE6DO43924 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PDE6DO43924 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
PDE6DO43924 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 AL359504.2-201ENST00000605506 1601 ntBASIC17.99■□□□□ 0.47
PDE6DO43924 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.99■□□□□ 0.47
PDE6DO43924 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6DO43924 AC137767.1-201ENST00000602918 1920 ntBASIC17.99■□□□□ 0.47
PDE6DO43924 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6DO43924 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.99■□□□□ 0.47
PDE6DO43924 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6DO43924 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6DO43924 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PDE6DO43924 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms