Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMAD9O15198 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD9O15198 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD9O15198 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.04■□□□□ 0.96
SMAD9O15198 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD9O15198 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.04■□□□□ 0.96
SMAD9O15198 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD9O15198 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD9O15198 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD9O15198 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD9O15198 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
SMAD9O15198 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD9O15198 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD9O15198 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.03■□□□□ 0.96
SMAD9O15198 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.03■□□□□ 0.96
SMAD9O15198 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.03■□□□□ 0.96
SMAD9O15198 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD9O15198 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD9O15198 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD9O15198 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD9O15198 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD9O15198 AC103724.3-201ENST00000564481 992 ntBASIC21.02■□□□□ 0.96
SMAD9O15198 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.02■□□□□ 0.96
SMAD9O15198 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.02■□□□□ 0.96
SMAD9O15198 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD9O15198 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD9O15198 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD9O15198 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD9O15198 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMAD9O15198 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
SMAD9O15198 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
SMAD9O15198 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.01■□□□□ 0.95
SMAD9O15198 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMAD9O15198 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.01■□□□□ 0.95
SMAD9O15198 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.01■□□□□ 0.95
SMAD9O15198 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD9O15198 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMAD9O15198 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21■□□□□ 0.95
SMAD9O15198 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMAD9O15198 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMAD9O15198 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SMAD9O15198 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21■□□□□ 0.95
SMAD9O15198 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21■□□□□ 0.95
SMAD9O15198 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21■□□□□ 0.95
SMAD9O15198 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMAD9O15198 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21■□□□□ 0.95
SMAD9O15198 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMAD9O15198 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD9O15198 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD9O15198 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SMAD9O15198 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
SMAD9O15198 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD9O15198 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD9O15198 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.99■□□□□ 0.95
SMAD9O15198 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD9O15198 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SMAD9O15198 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.98■□□□□ 0.95
SMAD9O15198 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.98■□□□□ 0.95
SMAD9O15198 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD9O15198 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMAD9O15198 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.98■□□□□ 0.95
SMAD9O15198 AC022211.4-201ENST00000625094 2161 ntBASIC20.97■□□□□ 0.95
SMAD9O15198 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD9O15198 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD9O15198 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD9O15198 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD9O15198 AC120024.1-201ENST00000562672 995 ntBASIC20.97■□□□□ 0.95
SMAD9O15198 AC093323.1-202ENST00000635031 2045 ntBASIC20.97■□□□□ 0.95
SMAD9O15198 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD9O15198 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD9O15198 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD9O15198 KRT18P24-201ENST00000344739 1156 ntBASIC20.96■□□□□ 0.95
SMAD9O15198 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.96■□□□□ 0.95
SMAD9O15198 THA1P-201ENST00000590384 1145 ntBASIC20.96■□□□□ 0.95
SMAD9O15198 AL031848.2-201ENST00000607670 837 ntBASIC20.96■□□□□ 0.95
SMAD9O15198 AC011551.1-201ENST00000614101 683 ntBASIC20.96■□□□□ 0.95
SMAD9O15198 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD9O15198 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD9O15198 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD9O15198 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD9O15198 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD9O15198 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD9O15198 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD9O15198 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD9O15198 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SMAD9O15198 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD9O15198 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms