Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
SDCBPO00560 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
SDCBPO00560 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SDCBPO00560 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SDCBPO00560 AC093536.1-201ENST00000569153 554 ntBASIC19.76■□□□□ 0.75
SDCBPO00560 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SDCBPO00560 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.76■□□□□ 0.75
SDCBPO00560 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SDCBPO00560 AC004812.2-201ENST00000611079 2094 ntBASIC19.75■□□□□ 0.75
SDCBPO00560 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDCBPO00560 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDCBPO00560 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.75■□□□□ 0.75
SDCBPO00560 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.75■□□□□ 0.75
SDCBPO00560 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
SDCBPO00560 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.75■□□□□ 0.75
SDCBPO00560 AC007029.1-201ENST00000604183 313 ntBASIC19.75■□□□□ 0.75
SDCBPO00560 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SDCBPO00560 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SDCBPO00560 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SDCBPO00560 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDCBPO00560 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SDCBPO00560 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SDCBPO00560 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SDCBPO00560 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.75■□□□□ 0.75
SDCBPO00560 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.74■□□□□ 0.75
SDCBPO00560 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.74■□□□□ 0.75
SDCBPO00560 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SDCBPO00560 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SDCBPO00560 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDCBPO00560 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.74■□□□□ 0.75
SDCBPO00560 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.74■□□□□ 0.75
SDCBPO00560 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDCBPO00560 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SDCBPO00560 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SDCBPO00560 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.74■□□□□ 0.75
SDCBPO00560 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDCBPO00560 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDCBPO00560 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDCBPO00560 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SDCBPO00560 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.73■□□□□ 0.75
SDCBPO00560 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SDCBPO00560 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SDCBPO00560 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SDCBPO00560 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SDCBPO00560 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.72■□□□□ 0.75
SDCBPO00560 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDCBPO00560 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SDCBPO00560 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDCBPO00560 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDCBPO00560 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDCBPO00560 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.72■□□□□ 0.75
SDCBPO00560 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.72■□□□□ 0.75
SDCBPO00560 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SDCBPO00560 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDCBPO00560 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.72■□□□□ 0.75
SDCBPO00560 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
SDCBPO00560 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDCBPO00560 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDCBPO00560 ABCB10P4-201ENST00000566803 2184 ntBASIC19.71■□□□□ 0.75
SDCBPO00560 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDCBPO00560 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDCBPO00560 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDCBPO00560 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDCBPO00560 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDCBPO00560 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SDCBPO00560 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SDCBPO00560 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.7■□□□□ 0.74
SDCBPO00560 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDCBPO00560 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDCBPO00560 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.7■□□□□ 0.74
SDCBPO00560 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDCBPO00560 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SDCBPO00560 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBPO00560 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.69■□□□□ 0.74
SDCBPO00560 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBPO00560 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.69■□□□□ 0.74
SDCBPO00560 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SDCBPO00560 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.69■□□□□ 0.74
SDCBPO00560 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.69■□□□□ 0.74
SDCBPO00560 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.69■□□□□ 0.74
SDCBPO00560 DUSP8P5-201ENST00000422884 1815 ntBASIC19.69■□□□□ 0.74
SDCBPO00560 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBPO00560 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBPO00560 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBPO00560 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBPO00560 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBPO00560 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBPO00560 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.67■□□□□ 0.74
SDCBPO00560 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SDCBPO00560 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SDCBPO00560 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBPO00560 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SDCBPO00560 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBPO00560 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBPO00560 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBPO00560 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.66■□□□□ 0.74
SDCBPO00560 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.66■□□□□ 0.74
SDCBPO00560 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBPO00560 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBPO00560 RNF126P1-201ENST00000567452 1320 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms