Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 CR559946.2-201ENST00000623684 991 ntBASIC19.85■□□□□ 0.77
TMEM235A6NFC5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TMEM235A6NFC5 HLA-L-211ENST00000482052 1765 ntBASIC19.85■□□□□ 0.77
TMEM235A6NFC5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.84■□□□□ 0.77
TMEM235A6NFC5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM235A6NFC5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 ZNRF2P2-203ENST00000454624 420 ntBASIC19.83■□□□□ 0.77
TMEM235A6NFC5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.83■□□□□ 0.77
TMEM235A6NFC5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM235A6NFC5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM235A6NFC5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM235A6NFC5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM235A6NFC5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM235A6NFC5 AL157400.5-201ENST00000507624 621 ntBASIC19.81■□□□□ 0.76
TMEM235A6NFC5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TMEM235A6NFC5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEM235A6NFC5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
TMEM235A6NFC5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 AC025884.2-201ENST00000553429 711 ntBASIC19.8■□□□□ 0.76
TMEM235A6NFC5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM235A6NFC5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 MIR3960-201ENST00000583311 91 ntBASIC19.79■□□□□ 0.76
TMEM235A6NFC5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM235A6NFC5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM235A6NFC5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TMEM235A6NFC5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM235A6NFC5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms