Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MEIS3P1A6NDR6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MEIS3P1A6NDR6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MEIS3P1A6NDR6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.89■□□□□ 0.77
MEIS3P1A6NDR6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.89■□□□□ 0.77
MEIS3P1A6NDR6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MEIS3P1A6NDR6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.89■□□□□ 0.77
MEIS3P1A6NDR6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MEIS3P1A6NDR6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MEIS3P1A6NDR6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MEIS3P1A6NDR6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 DUX4L11-201ENST00000611504 1267 ntBASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 DUX4L12-201ENST00000614593 1267 ntBASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 DUX4L14-201ENST00000621227 1267 ntBASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.86■□□□□ 0.77
MEIS3P1A6NDR6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MEIS3P1A6NDR6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 MIR6089-201ENST00000616698 64 ntBASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MEIS3P1A6NDR6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 HLA-L-211ENST00000482052 1765 ntBASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.83■□□□□ 0.77
MEIS3P1A6NDR6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MEIS3P1A6NDR6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
MEIS3P1A6NDR6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
MEIS3P1A6NDR6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MEIS3P1A6NDR6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
MEIS3P1A6NDR6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MEIS3P1A6NDR6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MEIS3P1A6NDR6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms