Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DUXBA0A1W2PPF3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DUXBA0A1W2PPF3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
DUXBA0A1W2PPF3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 MIR3960-201ENST00000583311 91 ntBASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DUXBA0A1W2PPF3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
DUXBA0A1W2PPF3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
DUXBA0A1W2PPF3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DUXBA0A1W2PPF3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19■□□□□ 0.63
DUXBA0A1W2PPF3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DUXBA0A1W2PPF3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 AL117328.2-201ENST00000624617 1940 ntBASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DUXBA0A1W2PPF3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 AC025884.2-201ENST00000553429 711 ntBASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DUXBA0A1W2PPF3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.96■□□□□ 0.63
DUXBA0A1W2PPF3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DUXBA0A1W2PPF3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.95■□□□□ 0.62
DUXBA0A1W2PPF3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DUXBA0A1W2PPF3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DUXBA0A1W2PPF3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.95■□□□□ 0.62
DUXBA0A1W2PPF3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DUXBA0A1W2PPF3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.94■□□□□ 0.62
DUXBA0A1W2PPF3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DUXBA0A1W2PPF3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms