Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 DUX4L25-201ENST00000624915 1269 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.54■□□□□ 0.88
TRDV1A0A1B0GX56 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 LINC01971-201ENST00000617888 1048 ntBASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRDV1A0A1B0GX56 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 AC233723.2-201ENST00000623798 2106 ntBASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRDV1A0A1B0GX56 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRDV1A0A1B0GX56 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
TRDV1A0A1B0GX56 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 AL162393.1-201ENST00000437852 946 ntBASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRDV1A0A1B0GX56 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.5■□□□□ 0.87
TRDV1A0A1B0GX56 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 HLA-V-202ENST00000446817 847 ntBASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRDV1A0A1B0GX56 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.48■□□□□ 0.87
TRDV1A0A1B0GX56 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.47■□□□□ 0.87
TRDV1A0A1B0GX56 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRDV1A0A1B0GX56 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRDV1A0A1B0GX56 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRDV1A0A1B0GX56 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRDV1A0A1B0GX56 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRDV1A0A1B0GX56 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 EP400NL-214ENST00000641289 2402 ntBASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TRDV1A0A1B0GX56 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRDV1A0A1B0GX56 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
TRDV1A0A1B0GX56 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 AC126177.7-201ENST00000547904 679 ntBASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 LINC00565-201ENST00000562710 2331 ntBASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRDV1A0A1B0GX56 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms