Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 AC233723.2-201ENST00000623798 2106 ntBASIC20.44■□□□□ 0.86
LINC00854A0A1B0GVQ3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00854A0A1B0GVQ3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00854A0A1B0GVQ3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00854A0A1B0GVQ3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
LINC00854A0A1B0GVQ3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00854A0A1B0GVQ3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.42■□□□□ 0.86
LINC00854A0A1B0GVQ3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
LINC00854A0A1B0GVQ3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00854A0A1B0GVQ3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00854A0A1B0GVQ3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00854A0A1B0GVQ3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00854A0A1B0GVQ3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00854A0A1B0GVQ3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.4■□□□□ 0.86
LINC00854A0A1B0GVQ3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC00854A0A1B0GVQ3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC00854A0A1B0GVQ3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.39■□□□□ 0.85
LINC00854A0A1B0GVQ3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.38■□□□□ 0.85
LINC00854A0A1B0GVQ3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00854A0A1B0GVQ3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00854A0A1B0GVQ3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00854A0A1B0GVQ3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms