Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.2■■■□□ 2.43
LOC102724428A0A0B4J2F2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LOC102724428A0A0B4J2F2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
LOC102724428A0A0B4J2F2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.19■■■□□ 2.42
LOC102724428A0A0B4J2F2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
LOC102724428A0A0B4J2F2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LOC102724428A0A0B4J2F2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.17■■■□□ 2.42
LOC102724428A0A0B4J2F2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LOC102724428A0A0B4J2F2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LOC102724428A0A0B4J2F2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
LOC102724428A0A0B4J2F2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LOC102724428A0A0B4J2F2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.16■■■□□ 2.42
LOC102724428A0A0B4J2F2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
LOC102724428A0A0B4J2F2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
LOC102724428A0A0B4J2F2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
LOC102724428A0A0B4J2F2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.16■■■□□ 2.42
LOC102724428A0A0B4J2F2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
LOC102724428A0A0B4J2F2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 MIR5787-201ENST00000611784 55 ntBASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.15■■■□□ 2.42
LOC102724428A0A0B4J2F2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
LOC102724428A0A0B4J2F2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LOC102724428A0A0B4J2F2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LOC102724428A0A0B4J2F2 AL136967.2-201ENST00000623968 743 ntBASIC30.14■■■□□ 2.42
LOC102724428A0A0B4J2F2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
LOC102724428A0A0B4J2F2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LOC102724428A0A0B4J2F2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.14■■■□□ 2.41
LOC102724428A0A0B4J2F2 AC142086.6-201ENST00000621154 1765 ntBASIC30.13■■■□□ 2.41
LOC102724428A0A0B4J2F2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LOC102724428A0A0B4J2F2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LOC102724428A0A0B4J2F2 AC105265.2-201ENST00000467189 838 ntBASIC30.13■■■□□ 2.41
LOC102724428A0A0B4J2F2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.13■■■□□ 2.41
LOC102724428A0A0B4J2F2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
LOC102724428A0A0B4J2F2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LOC102724428A0A0B4J2F2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.12■■■□□ 2.41
LOC102724428A0A0B4J2F2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.12■■■□□ 2.41
LOC102724428A0A0B4J2F2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
LOC102724428A0A0B4J2F2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LOC102724428A0A0B4J2F2 AC104564.3-201ENST00000582367 638 ntBASIC30.12■■■□□ 2.41
LOC102724428A0A0B4J2F2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.11■■■□□ 2.41
LOC102724428A0A0B4J2F2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.11■■■□□ 2.41
LOC102724428A0A0B4J2F2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.11■■■□□ 2.41
LOC102724428A0A0B4J2F2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.11■■■□□ 2.41
LOC102724428A0A0B4J2F2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.1■■■□□ 2.41
LOC102724428A0A0B4J2F2 AF213884.3-201ENST00000563833 479 ntBASIC30.1■■■□□ 2.41
LOC102724428A0A0B4J2F2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
LOC102724428A0A0B4J2F2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.1■■■□□ 2.41
LOC102724428A0A0B4J2F2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
LOC102724428A0A0B4J2F2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LOC102724428A0A0B4J2F2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LOC102724428A0A0B4J2F2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.09■■■□□ 2.41
LOC102724428A0A0B4J2F2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.09■■■□□ 2.41
LOC102724428A0A0B4J2F2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LOC102724428A0A0B4J2F2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LOC102724428A0A0B4J2F2 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.08■■■□□ 2.41
LOC102724428A0A0B4J2F2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LOC102724428A0A0B4J2F2 MIR939-201ENST00000401314 82 ntBASIC30.07■■■□□ 2.4
LOC102724428A0A0B4J2F2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
LOC102724428A0A0B4J2F2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
LOC102724428A0A0B4J2F2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
LOC102724428A0A0B4J2F2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 AC004448.1-201ENST00000458332 883 ntBASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LOC102724428A0A0B4J2F2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
LOC102724428A0A0B4J2F2 AP001330.3-201ENST00000520123 633 ntBASIC30.05■■■□□ 2.4
LOC102724428A0A0B4J2F2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LOC102724428A0A0B4J2F2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LOC102724428A0A0B4J2F2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.04■■■□□ 2.4
LOC102724428A0A0B4J2F2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.04■■■□□ 2.4
LOC102724428A0A0B4J2F2 AC096887.2-201ENST00000623443 1957 ntBASIC30.04■■■□□ 2.4
LOC102724428A0A0B4J2F2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
LOC102724428A0A0B4J2F2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
LOC102724428A0A0B4J2F2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
LOC102724428A0A0B4J2F2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
LOC102724428A0A0B4J2F2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.03■■■□□ 2.4
LOC102724428A0A0B4J2F2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LOC102724428A0A0B4J2F2 AC097639.1-201ENST00000565519 1891 ntBASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms