Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 AL035685.1-201ENST00000636663 812 ntBASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 AP003733.4-201ENST00000623785 1697 ntBASIC17.54■□□□□ 0.4
TRAV25A0A0B4J276 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 KRT125P-201ENST00000546827 989 ntBASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV25A0A0B4J276 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV25A0A0B4J276 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV25A0A0B4J276 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV25A0A0B4J276 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV25A0A0B4J276 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV25A0A0B4J276 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 AC142381.3-201ENST00000568208 1670 ntBASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV25A0A0B4J276 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV25A0A0B4J276 AC022211.4-201ENST00000625094 2161 ntBASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV25A0A0B4J276 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 AC021242.3-201ENST00000607598 1377 ntBASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV25A0A0B4J276 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 AC239859.2-201ENST00000444165 318 ntBASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV25A0A0B4J276 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms