Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 MIR6089-201ENST00000616698 64 ntBASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-1A0A0B4J245 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-1A0A0B4J245 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 AL024507.2-201ENST00000606070 2574 ntBASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV12-1A0A0B4J245 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-1A0A0B4J245 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-1A0A0B4J245 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV12-1A0A0B4J245 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV12-1A0A0B4J245 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV12-1A0A0B4J245 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV12-1A0A0B4J245 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV12-1A0A0B4J245 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-1A0A0B4J245 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 AC005559.1-201ENST00000589661 871 ntBASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-1A0A0B4J245 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV12-1A0A0B4J245 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms