Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 ABCB10P4-201ENST00000566803 2184 ntBASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-2A0A087WT02 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 AL121603.2-201ENST00000557373 2117 ntBASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-2A0A087WT02 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-2A0A087WT02 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-2A0A087WT02 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-2A0A087WT02 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 AC137767.1-201ENST00000602918 1920 ntBASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRAV9-2A0A087WT02 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV9-2A0A087WT02 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms