Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 FAM86MP-201ENST00000340703 885 ntBASIC16.33■□□□□ 0.2
YIPF1Q9Y548 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.33■□□□□ 0.2
YIPF1Q9Y548 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 C2orf27AP3-201ENST00000434123 579 ntBASIC16.33■□□□□ 0.2
YIPF1Q9Y548 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 AL354718.3-201ENST00000616414 581 ntBASIC16.33■□□□□ 0.2
YIPF1Q9Y548 CR382287.1-201ENST00000623954 586 ntBASIC16.33■□□□□ 0.2
YIPF1Q9Y548 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AC025181.2-201ENST00000606994 802 ntBASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AP005019.2-201ENST00000615104 511 ntBASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 CYP2T1P-202ENST00000641596 2535 ntBASIC16.32■□□□□ 0.2
YIPF1Q9Y548 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
YIPF1Q9Y548 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AL603832.2-201ENST00000566195 2125 ntBASIC16.31■□□□□ 0.2
YIPF1Q9Y548 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 FAM21FP-201ENST00000426241 1131 ntBASIC16.31■□□□□ 0.2
YIPF1Q9Y548 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 KRT18P25-201ENST00000508931 1278 ntBASIC16.31■□□□□ 0.2
YIPF1Q9Y548 RNA5SP412-201ENST00000516234 123 ntBASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 BX539320.1-201ENST00000623759 877 ntBASIC16.31■□□□□ 0.2
YIPF1Q9Y548 RHOXF1P1-202ENST00000635473 501 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms