Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HDGFL3Q9Y3E1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 CICP13-201ENST00000422015 2789 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC074338.1-201ENST00000416825 156 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC015922.1-201ENST00000421102 1152 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RPL13P2-201ENST00000440687 659 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 TIMM17BP1-201ENST00000545713 516 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC009407.1-201ENST00000568958 598 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 AC105917.1-201ENST00000506637 2539 ntBASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDGFL3Q9Y3E1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AC020658.6-201ENST00000623564 1870 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AC127383.1-201ENST00000444697 1800 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 INGX-202ENST00000489074 768 ntBASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HDGFL3Q9Y3E1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms