Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AC107918.4-201ENST00000641966 3141 ntBASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 RPS15P9-201ENST00000494093 319 ntBASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SART3-203ENST00000546611 1184 ntBASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 MIR3909-201ENST00000579518 119 ntBASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AC138894.3-201ENST00000603787 634 ntBASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AC127383.1-201ENST00000444697 1800 ntBASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.96□□□□□ -0.33
RCL1Q9Y2P8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RCL1Q9Y2P8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 MTDHP3-201ENST00000594186 672 ntBASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms