Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 MIR6752-201ENST00000618442 71 ntBASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 AC024909.3-201ENST00000611513 2257 ntBASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RPH3AQ9Y2J0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 AL365203.3-201ENST00000609742 2057 ntBASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 FAM207CP-201ENST00000443486 507 ntBASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 BNIP3P1-202ENST00000550043 1585 ntBASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RPH3AQ9Y2J0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 KRT8P12-202ENST00000472924 1397 ntBASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 AC004987.2-201ENST00000395959 1148 ntBASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms