Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC4Q9Y296 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 LINC00628-201ENST00000628516 1289 ntBASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 AC232323.1-201ENST00000540724 2099 ntBASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 REXO1L5P-201ENST00000622260 2098 ntBASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC4Q9Y296 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AL691432.1-201ENST00000596308 1422 ntBASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AL035456.1-201ENST00000456064 1369 ntBASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AC004987.2-201ENST00000395959 1148 ntBASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AC025678.2-201ENST00000562061 970 ntBASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AC007967.4-201ENST00000614700 386 ntBASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAPPC4Q9Y296 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms