Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 MIR4259-201ENST00000584466 101 ntBASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 DBET-201ENST00000630918 3363 ntBASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 AL589702.1-201ENST00000641229 1509 ntBASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 MIR4525-201ENST00000580000 75 ntBASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDZRN3Q9UPQ7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 FAM8A2P-201ENST00000528813 1142 ntBASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDZRN3Q9UPQ7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms