Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 AC116165.1-201ENST00000611806 668 ntBASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 AC063926.2-201ENST00000623766 1308 ntBASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIP2Q9UDT6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AC093004.1-201ENST00000508850 424 ntBASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AC140912.1-201ENST00000577171 1054 ntBASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AL358472.5-202ENST00000641448 1267 ntBASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLIP2Q9UDT6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 TIMM17BP1-201ENST00000545713 516 ntBASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 AP001282.1-201ENST00000531301 1499 ntBASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms