Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 ACTBP8-201ENST00000403258 1108 ntBASIC17.48■□□□□ 0.39
VTA1Q9NP79 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 FAM86HP-204ENST00000513466 959 ntBASIC17.48■□□□□ 0.39
VTA1Q9NP79 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 AC025181.2-201ENST00000606994 802 ntBASIC17.48■□□□□ 0.39
VTA1Q9NP79 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 NKILA-202ENST00000614771 2598 ntBASIC17.48■□□□□ 0.39
VTA1Q9NP79 AC092364.2-201ENST00000596710 2692 ntBASIC17.48■□□□□ 0.39
VTA1Q9NP79 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 NUS1P3-201ENST00000423502 862 ntBASIC17.47■□□□□ 0.39
VTA1Q9NP79 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 AC114812.1-204ENST00000449669 728 ntBASIC17.47■□□□□ 0.39
VTA1Q9NP79 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 AL606495.2-201ENST00000605867 535 ntBASIC17.47■□□□□ 0.39
VTA1Q9NP79 AC244093.1-201ENST00000610837 814 ntBASIC17.47■□□□□ 0.39
VTA1Q9NP79 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.47■□□□□ 0.39
VTA1Q9NP79 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VTA1Q9NP79 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.47■□□□□ 0.39
VTA1Q9NP79 AHCYP2-201ENST00000430630 1300 ntBASIC17.47■□□□□ 0.39
VTA1Q9NP79 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC018695.7-201ENST00000624587 2492 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 RNU1-114P-201ENST00000365297 166 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 KLF2P2-201ENST00000416807 1039 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC099548.2-209ENST00000480264 625 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 RNA5SP486-201ENST00000515961 83 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC103810.3-201ENST00000583567 96 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC091271.1-201ENST00000611877 1162 ntBASIC17.46■□□□□ 0.39
VTA1Q9NP79 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms