Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 CYP46A4P-201ENST00000414953 267 ntBASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 HIST2H2BB-201ENST00000449108 381 ntBASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 SPTLC1P5-201ENST00000450718 252 ntBASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLXNA4Q9HCM2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 AC100850.1-201ENST00000506768 649 ntBASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 RN7SL48P-201ENST00000579283 293 ntBASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLXNA4Q9HCM2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC245884.6-201ENST00000515672 1067 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 LINC02447-202ENST00000501888 2146 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC007274.2-201ENST00000421675 662 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC114812.1-204ENST00000449669 728 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 TMEM198B-204ENST00000484016 896 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC126915.1-201ENST00000522847 1038 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 AP001002.3-201ENST00000623482 206 ntBASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLXNA4Q9HCM2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms