Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 AC097359.3-201ENST00000603982 1210 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 AC055717.3-201ENST00000622967 595 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 AC091951.1-201ENST00000512854 2465 ntBASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 AC126365.1-201ENST00000578585 1514 ntBASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 AC139530.3-201ENST00000620344 690 ntBASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 MIR600HG-201ENST00000449175 5984 ntBASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRTM1Q9HBL6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 LINC02228-204ENST00000642115 2962 ntBASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms