Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AL583810.1-201ENST00000553344 1045 ntBASIC16.38■□□□□ 0.21
LRRC3Q9BY71 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 AP001063.1-201ENST00000568332 529 ntBASIC16.38■□□□□ 0.21
LRRC3Q9BY71 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 AL596087.1-201ENST00000400979 1969 ntBASIC16.38■□□□□ 0.21
LRRC3Q9BY71 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC3Q9BY71 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AL133267.1-201ENST00000398220 340 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 RPL7P3-201ENST00000441388 714 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 GAPDHP40-201ENST00000505218 1006 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AP000812.2-201ENST00000538934 718 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AC009486.1-201ENST00000569860 813 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AC015910.1-201ENST00000579400 975 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 MTHFR-217ENST00000641820 1569 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 AC092364.2-201ENST00000596710 2692 ntBASIC16.37■□□□□ 0.21
LRRC3Q9BY71 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRRC3Q9BY71 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AC008894.3-201ENST00000624324 3103 ntBASIC16.36■□□□□ 0.21
LRRC3Q9BY71 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC3Q9BY71 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms