Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AC105233.2-201ENST00000523697 349 ntBASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AF228730.5-201ENST00000530288 346 ntBASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AL390754.1-201ENST00000619088 582 ntBASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 LINC02447-202ENST00000501888 2146 ntBASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAF4Q9BUZ4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 BEND3P1-201ENST00000421591 1944 ntBASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AC009090.5-201ENST00000624886 2285 ntBASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AC142381.1-201ENST00000426099 345 ntBASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms