Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 KRT18P13-201ENST00000400056 1290 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 MIR940-201ENST00000401276 94 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 HLA-J-202ENST00000469281 1241 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 BX005266.1-201ENST00000473402 457 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 AC105339.3-201ENST00000560043 636 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 AC006557.2-201ENST00000592985 1240 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 AC025062.2-201ENST00000605477 670 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 AC107918.4-202ENST00000641623 219 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 PMS2P7-201ENST00000506558 1336 ntBASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NDUFAF3Q9BU61 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 AC136621.1-201ENST00000624017 2304 ntBASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 PRYP5-201ENST00000451909 266 ntBASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.3□□□□□ -0.44
NDUFAF3Q9BU61 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms