Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 TSPY16P-201ENST00000449843 468 ntBASIC11.05□□□□□ -0.64
UPK3BQ9BT76 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 OR2I1P-210ENST00000642037 4691 ntBASIC11.05□□□□□ -0.64
UPK3BQ9BT76 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.05□□□□□ -0.64
UPK3BQ9BT76 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 FO393414.2-201ENST00000405153 598 ntBASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AC243562.2-201ENST00000561247 970 ntBASIC11.04□□□□□ -0.64
UPK3BQ9BT76 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AL844908.2-201ENST00000609461 460 ntBASIC11.04□□□□□ -0.64
UPK3BQ9BT76 MIR6069-201ENST00000620069 79 ntBASIC11.04□□□□□ -0.64
UPK3BQ9BT76 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AC008761.3-201ENST00000624803 892 ntBASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms