Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNA5SP410-201ENST00000516285 106 ntBASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 AC023024.2-201ENST00000623561 1993 ntBASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.36□□□□□ -0.27
HDHD3Q9BSH5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AC148477.4-201ENST00000613430 1793 ntBASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 RPS8P6-201ENST00000426177 609 ntBASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AC112191.1-201ENST00000523689 701 ntBASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AC027307.2-201ENST00000591252 911 ntBASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
HDHD3Q9BSH5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 RPL13AP23-201ENST00000480739 586 ntBASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AL135744.1-201ENST00000565098 629 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms