Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 C1QBPP1-201ENST00000400117 770 ntBASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM47Q9BQJ4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 AL162726.2-201ENST00000438986 1017 ntBASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 TTTY23B-201ENST00000442790 549 ntBASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 AC025181.2-201ENST00000606994 802 ntBASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM47Q9BQJ4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 AC084364.1-201ENST00000551967 1556 ntBASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 SOCS2P1-201ENST00000417727 557 ntBASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 AC007389.4-201ENST00000454674 793 ntBASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 AC107373.2-201ENST00000607735 490 ntBASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 AC008741.2-201ENST00000612792 3115 ntBASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM47Q9BQJ4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM47Q9BQJ4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM47Q9BQJ4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM47Q9BQJ4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM47Q9BQJ4 AC007950.2-201ENST00000615045 2347 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms