Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 GGT3P-204ENST00000453783 1664 ntBASIC14.24□□□□□ -0.13
USB1Q9BQ65 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 SERBP1P3-201ENST00000459980 809 ntBASIC14.24□□□□□ -0.13
USB1Q9BQ65 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 AC105021.1-202ENST00000570572 669 ntBASIC14.24□□□□□ -0.13
USB1Q9BQ65 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
USB1Q9BQ65 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
USB1Q9BQ65 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AL139010.1-201ENST00000454878 894 ntBASIC14.23□□□□□ -0.13
USB1Q9BQ65 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AC061975.2-201ENST00000581722 295 ntBASIC14.23□□□□□ -0.13
USB1Q9BQ65 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AL390955.2-201ENST00000603032 514 ntBASIC14.23□□□□□ -0.13
USB1Q9BQ65 AL589739.1-201ENST00000607720 493 ntBASIC14.23□□□□□ -0.13
USB1Q9BQ65 AL512356.3-201ENST00000623005 461 ntBASIC14.23□□□□□ -0.13
USB1Q9BQ65 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 AC138035.3-201ENST00000622706 2791 ntBASIC14.23□□□□□ -0.13
USB1Q9BQ65 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
USB1Q9BQ65 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
USB1Q9BQ65 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 AC087499.5-201ENST00000452760 1342 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.22□□□□□ -0.13
USB1Q9BQ65 AC079781.5-202ENST00000641784 3743 ntBASIC14.22□□□□□ -0.13
USB1Q9BQ65 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
USB1Q9BQ65 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms