Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 RN7SL837P-201ENST00000463010 287 ntBASIC16.43■□□□□ 0.22
SMOQ99835 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.43■□□□□ 0.22
SMOQ99835 AC124283.3-201ENST00000570869 594 ntBASIC16.43■□□□□ 0.22
SMOQ99835 AC132938.2-201ENST00000579188 680 ntBASIC16.43■□□□□ 0.22
SMOQ99835 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.43■□□□□ 0.22
SMOQ99835 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 RPSAP52-203ENST00000622976 1023 ntBASIC16.43■□□□□ 0.22
SMOQ99835 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 AL033527.5-201ENST00000641382 801 ntBASIC16.43■□□□□ 0.22
SMOQ99835 AL591163.1-201ENST00000641757 987 ntBASIC16.43■□□□□ 0.22
SMOQ99835 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SMOQ99835 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMOQ99835 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SMOQ99835 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SMOQ99835 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 AC134915.1-201ENST00000426461 574 ntBASIC16.42■□□□□ 0.22
SMOQ99835 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 GAPDHP40-201ENST00000505218 1006 ntBASIC16.42■□□□□ 0.22
SMOQ99835 AC026410.3-201ENST00000514280 936 ntBASIC16.42■□□□□ 0.22
SMOQ99835 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.42■□□□□ 0.22
SMOQ99835 AC120045.2-201ENST00000567334 178 ntBASIC16.42■□□□□ 0.22
SMOQ99835 AC133539.2-201ENST00000604757 467 ntBASIC16.42■□□□□ 0.22
SMOQ99835 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 AC090616.6-203ENST00000579186 1945 ntBASIC16.42■□□□□ 0.22
SMOQ99835 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.42■□□□□ 0.22
SMOQ99835 AC084364.1-201ENST00000551967 1556 ntBASIC16.42■□□□□ 0.22
SMOQ99835 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 AC063926.2-201ENST00000623766 1308 ntBASIC16.42■□□□□ 0.22
SMOQ99835 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMOQ99835 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.42■□□□□ 0.22
SMOQ99835 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.41■□□□□ 0.22
SMOQ99835 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.41■□□□□ 0.22
SMOQ99835 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.41■□□□□ 0.22
SMOQ99835 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SMOQ99835 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.41■□□□□ 0.22
SMOQ99835 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms