Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 AC092183.1-201ENST00000469884 875 ntBASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 LINC01115-203ENST00000606068 577 ntBASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 AC074044.1-201ENST00000609673 707 ntBASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 AL109936.8-201ENST00000641772 604 ntBASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG4P5Q96PW8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 SDHAP3-202ENST00000515467 728 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 IGHV3-42-201ENST00000520410 361 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 ZNF890P-202ENST00000530367 1156 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AC044860.1-202ENST00000559481 777 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AC106028.4-201ENST00000614509 607 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AF228730.6-201ENST00000641497 218 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AC084121.3-201ENST00000641716 218 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 AC006486.2-201ENST00000624246 2199 ntBASIC16.23■□□□□ 0.19
CSPG4P5Q96PW8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC055876.3-201ENST00000431496 288 ntBASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC241585.1-201ENST00000433527 519 ntBASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC138649.4-201ENST00000612222 287 ntBASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 AC093512.1-201ENST00000617969 520 ntBASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG4P5Q96PW8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms