Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 CDC14C-201ENST00000428251 1719 ntBASIC12.02□□□□□ -0.49
AP1S3Q96PC3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
AP1S3Q96PC3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AC013268.4-201ENST00000637413 2228 ntBASIC12.01□□□□□ -0.49
AP1S3Q96PC3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 IGHV3-47-201ENST00000425060 335 ntBASIC12.01□□□□□ -0.49
AP1S3Q96PC3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AP002414.4-201ENST00000589764 1148 ntBASIC12.01□□□□□ -0.49
AP1S3Q96PC3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AL139424.1-201ENST00000607572 797 ntBASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AL022326.1-202ENST00000641533 845 ntBASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AC005332.1-201ENST00000577698 1310 ntBASIC12.01□□□□□ -0.49
AP1S3Q96PC3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP1S3Q96PC3 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP1S3Q96PC3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 FXN-203ENST00000396366 922 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 NUS1P2-201ENST00000417358 873 ntBASIC12□□□□□ -0.49
AP1S3Q96PC3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms